[1]JECK W R, SORRENTINO J A, WANG K,et al. Circular RNAs are abundant, conserved, and associated with ALU repeats[J]. RNA, 2013, 19(2): 141-157.
[2]SANGER H L, KLOTZ G, RIESNER D, et al. Viroids are single-stranded covalently closed circular RNA molecules existing as highly base-paired rod-like structures[J]. Proc Natl Acad Sci U S A, 1976, 73(11): 3852-3856.
[3]CAPEL B, SWAIN A, NICOLIS S, et al. Circular transcripts of the testis-determining gene Sry in adult mouse testis[J]. Cell, 1993, 73(5): 1019-1030.
[4]ABDELMOHSEN K, PANDA A C, DE S, et al. Circular RNAs in monkey muscle: age-dependent changes[J]. Aging(Albany NY), 2015, 7(11): 903-910.
[5]VENØ M T, HANSEN T B, VENØ S T,et al. Spatio-temporal regulation of circular RNA expression during porcine embryonic brain development[J]. Genome Biol, 2015, 16: 245.
[6]BURD C E, JECK W R, LIU Y,et al. Expression of linear and novel circular forms of an INK4/ARF-associated non-coding RNA correlates with atherosclerosis risk[J]. PLoS Genet, 2010, 6(12):e1001233.
[7]COCQUERELLE C, MASCREZ B, HÉTUIN D,et al. Mis-splicing yields circular RNA molecules[J]. FASEB J, 1993, 7(1): 155-160.
[8]SALZMAN J, CHEN R E, OLSEN M N, et al. Cell-type specific features of circular RNA expression[J]. PLoS Genet, 2013, 9(9): e1003777.
[9]MEMCZAK S, JENS M, ELEFSINIOTI A, et al. Circular RNAs are a large class of animal RNAs with regulatory potency[J]. Nature, 2013, 495(7441): 333-338.
[10]SALZMAN J, GAWAD C, WANG P L,et al. Circular RNAs are the predominant transcript isoform from hundreds of human genes in diverse cell types[J]. PLoS One, 2012, 7(2): e30733.
[11]ZHANG X O, WANG H B, ZHANG Y,et al. Complementary sequence-mediated exon circularization[J]. Cell, 2014, 159(1): 134-147.
[12]ZHANG Y, ZHANG X O, CHEN T,et al. Circular intronic long noncoding RNAs[J]. Mol Cell, 2013, 51(6): 792-806.
[13]LI Z, HUANG C, BAO C,et al. Exon-intron circular RNAs regulate transcription in the nucleus[J]. Nat Struct Mol Biol,2015, 22(3): 256-264.
[14]HANSEN T B, JENSEN T I, CLAUSEN B H,et al. Natural RNA circles function as efficient microRNA sponges[J]. Nature, 2013, 495(7441): 384-388.
[15]WANG Y, WANG Z. Efficient backsplicing produces translatable circular mRNAs[J]. RNA, 2015, 21(2): 172-179.
[16]JECK W R, SHARPLESS N E. Detecting and characterizing circular RNAs[J]. Nat Biotechnol, 2014, 32(5): 453-461.
[17]CRICK F. Split genes and RNA splicing[J]. Science, 1979, 204(4390): 264-271.
[18]BLACK D L. Mechanisms of alternative pre-messenger RNA splicing[J]. Annu Rev Biochem, 2003, 72: 291-336.
[19]VICENS Q, WESTHOF E. Biogenesis of circular RNAs[J]. Cell, 2014, 159(1): 13-14.
[20]ASHWAL-FLUSS R, MEYER M, PAMUDURTI N R, et al. circRNA biogenesis competes with pre-mRNA splicing[J]. Mol Cell, 2014, 56(1): 55-66.
[21]SHEN T, HAN M, WEI G,et al. An intriguing RNA species—perspectives of circularized RNA[J]. Protein Cell, 2015, 6(12): 871-880.
[22]RODRÍGUEZ-TRELLES F, TARRÍO R, AYALA F J. Origins and evolution of spliceosomal introns[J]. Annu Rev Genet, 2006, 40: 47-76.
[23]CONN S J, PILLMAN K A, TOUBIA J,et al. The RNA binding protein Quaking regulates formation of circRNAs[J]. Cell, 2015, 160(6): 1125-1134.
[24]IVANOV A, MEMCZAK S, WYLER E,et al. Analysis of intron sequences reveals hallmarks of circular RNA biogenesis in animals[J]. Cell Rep, 2015, 10(2): 170-177.
[25]SUZUKI H, TSUKAHARA T. A view of pre-mRNA splicing from RNase R resistant RNAs[J]. Int J Mol Sci, 2014, 15(6): 9331-9342.
[26]BAHN J H, ZHANG Q, LI F,et al. The landscape of microRNA, Piwi-interacting RNA, and circular RNA in human saliva[J]. Clin Chem, 2015, 61(1): 221-230.
[27]CHEN L L, YANG L. Regulation of circRNA biogenesis[J]. RNA Biol, 2015, 12(4): 381-388.
[28]SURONO A, TAKESHIMA Y, WIBAWA T,et al. Circular dystrophin RNAs consisting of exons that were skipped by alternative splicing[J]. Hum Mol Genet, 1999, 8(3): 493-500.
[29]HANSEN T B, KJEMS J, DAMGAARD C K. Circular RNA and miR-7 in cancer[J]. Cancer Res, 2013, 73(18): 5609-5612.
[30]ZHENG Q, BAO C, GUO W,et al. Circular RNA profiling reveals an abundant circHIPK3 that regulates cell growth by sponging multiple miRNAs[J]. Nat Commun, 2016, 7:11215.
[31]GUO J U, AGARWAL V, GUO H,et al. Expanded identification and characterization of mammalian circular RNAs[J]. Genome Biol, 2014, 15(7): 409.
[32]QU S, YANG X, LI X,et al. Circular RNA: a new star of noncoding RNAs[J]. Cancer Lett, 2015, 365(2): 141-148.
[33]LI Y, ZHENG Q, BAO C,et al. Circular RNA is enriched and stable in exosomes: a promising biomarker for cancer diagnosis[J]. Cell Res, 2015, 25(8): 981-984.
[34]KOS A, DIJKEMA R, ARNBERG A C,et al. The hepatitis delta (δ) virus possesses a circular RNA[J]. Nature, 1985, 323(6088): 558-560.
[35]ABE N, HIROSHIMA M, MARUYAMA H,et al. Rolling circle amplification in a prokaryotic translation system using small circular RNA[J]. Angew Chem Int Ed Engl, 2013, 52(27): 7004-7008.
[36]ABE N, MATSUMOTO K, NISHIHARA M,et al. Rolling circle translation of circular RNA in living human cells[J]. Sci Rep, 2015, 5: 16435.
[37]PERRIMAN R, ARES M Jr. Circular mRNA can direct translation of extremely long repeating-sequence proteins in vivo[J]. RNA, 1998, 4(9): 1047-1054.
[38]CHEN L L. The biogenesis and emerging roles of circular RNAs[J]. Nat Rev Mol Cell Biol, 2016, 17(4):205-211.
[39]ROMEO T. Global regulation by the small RNA-binding protein CsrA and the non-coding RNA molecule CsrB[J]. Mol Microbiol, 1998, 29(6): 1321-1330.
[40]YIN Q F, YANG L, ZHANG Y,et al. Long noncoding RNAs with snoRNA ends[J]. Mol Cell, 2012, 48(2): 219-230.
[41]SUZUKI H, ZUO Y, WANG J,et al. Characterization of RNase R-digested cellular RNA source that consists of lariat and circular RNAs from pre-mRNA splicing[J]. Nucleic Acids Res, 2006, 34(8): e63.
[42]TABAK H F, VAN DER HORST G, SMIT J,et al. Discrimination between RNA circles, interlocked RNA circles and lariats using two-dimensional polyacrylamide gel electrophoresis[J]. Nucleic Acids Res, 1988, 16(14): 6597-6605.
[43]HOFFMANN S, OTTO C, DOOSE G,et al. A multi-split mapping algorithm for circular RNA, splicing, trans-splicing and fusion detection[J]. Genome Biol, 2014, 15(2): R34.
[44]WANG K, SINGH D, ZENG Z,et al. MapSplice: accurate mapping of RNA-seq reads for splice junction discovery[J]. Nucleic Acids Res, 2010, 38(18): e178.
[45]EBBESEN K K, KJEMS J, HANSEN T B. Circular RNAs: Identification, biogenesis and function[J]. Biochim Biophys Acta, 2016, 1859(1):163-168.
[46]http://www.circbase.org/.
[47]BACHMAYR-HEYDA A, REINER A T, AUER K,et al. Correlation of circular RNA abundance with proliferation-exemplified with colorectal and ovarian cancer, idiopathic lung fibrosis, and normal human tissues[J]. Sci Rep, 2015, 5:8057.
[48]MEMCZAK S, PAPAVASILEIOU P, PETERS O,et al. Identification and characterization of circular RNAs as a new class of putative biomarkers in human blood[J]. PLoS One, 2015, 10(10): e0141214.
[49]LI J, YANG J, ZHOU P,et al. Circular RNAs in cancer: novel insights into origins, properties, functions and implications[J]. Am J Cancer Res, 2015, 5(2): 472-480.
[50]LI P, CHEN S, CHEN H,et al. Using circular RNA as a novel type of biomarker in the screening of gastric cancer[J]. Clin Chim Acta, 2015, 444: 132-136. |